RSeqAn

DOI: 10.18129/B9.bioc.RSeqAn    

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see RSeqAn.

R SeqAn

Bioconductor version: 3.10

Headers and some wrapper functions from the SeqAn C++ library for ease of usage in R.

Author: August Guang [aut, cre]

Maintainer: August Guang <august.guang at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RSeqAn")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RSeqAn")

 

HTML	R Script	Introduction to Using RSeqAn
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	Infrastructure, Software
Version	1.6.0
In Bioconductor since	BioC 3.7 (R-3.5) (2 years)
License	BSD_3_clause + file LICENSE
Depends
Imports	Rcpp
LinkingTo	Rcpp
Suggests	knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL
BugReports	https://github.com/compbiocore/RSeqAn/issues
Depends On Me
Imports Me	qckitfastq
Suggests Me
Links To Me	qckitfastq
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RSeqAn_1.6.0.tar.gz
Windows Binary	RSeqAn_1.6.0.zip
Mac OS X 10.11 (El Capitan)	RSeqAn_1.6.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RSeqAn
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RSeqAn
Package Short Url	https://bioconductor.org/packages/RSeqAn/
Package Downloads Report	Download Stats