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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CausalR")
In most cases, you don't need to download the package archive at all.
CausalR
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see CausalR.
Causal Reasoning Methods
Bioconductor version: 3.3
Causal reasoning methods for biological networks, to enable regulator prediction and reconstruction of regulatory networks from high dimensional data.
Author: Glyn Bradley, Steven Barrett, David Wiley, Bhushan Bonde, Peter Woollard, Chirag Mistry, David Riley, Mark Pipe
Maintainer: Glyn Bradley <glyn.x.bradley at gsk.com>, Steven Barrett <steven.j.barrett at gsk.com>, Bhushan Bonde <bkbonde at gmail.com>
Citation (from within R,
enter citation("CausalR")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CausalR")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CausalR")
| R Script | CausalR : an R Package for causal reasoning on networks | |
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Network, Software |
| Version | 1.4.3 |
| In Bioconductor since | BioC 3.2 (R-3.2) (1 year) |
| License | GPL (>= 2) |
| Depends | R (>= 3.2) |
| Imports | igraph |
| LinkingTo | |
| Suggests | knitr, RUnit, BiocGenerics |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | CausalR_1.4.3.tar.gz |
| Windows Binary | CausalR_1.4.3.zip |
| Mac OS X 10.9 (Mavericks) | CausalR_1.4.3.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CausalR/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/CausalR/ |
| Package Downloads Report | Download Stats |
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