To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProteomicsAnnotationHubData")

In most cases, you don't need to download the package archive at all.

ProteomicsAnnotationHubData

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see ProteomicsAnnotationHubData.

Transform public proteomics data resources into Bioconductor Data Structures

Bioconductor version: 3.3

These recipes convert a variety and a growing number of public proteomics data sets into easily-used standard Bioconductor data structures.

Author: Gatto Laurent [aut, cre], Sonali Arora [aut]

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

Citation (from within R, enter citation("ProteomicsAnnotationHubData")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProteomicsAnnotationHubData")

HTML	R Script	Proteomics Data in Annotation Hub
PDF		Reference Manual
Text		NEWS

biocViews	DataImport, Proteomics, Software
Version	1.2.2
In Bioconductor since	BioC 3.2 (R-3.2) (1 year)
License	Artistic-2.0
Depends	AnnotationHub(>= 2.1.45), AnnotationHubData
Imports	mzR(>= 2.3.2), MSnbase, Biostrings, GenomeInfoDb, utils, Biobase, BiocInstaller, RCurl
LinkingTo
Suggests	knitr, BiocStyle, rmarkdown, testthat
SystemRequirements
Enhances
URL	https://github.com/lgatto/ProteomicsAnnotationHubData
BugReports	https://github.com/lgatto/ProteomicsAnnotationHubData/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	ProteomicsAnnotationHubData_1.2.2.tar.gz
Windows Binary	ProteomicsAnnotationHubData_1.2.2.zip
Mac OS X 10.9 (Mavericks)	ProteomicsAnnotationHubData_1.2.2.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/ProteomicsAnnotationHubData/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/ProteomicsAnnotationHubData/
Package Downloads Report	Download Stats

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