To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RchyOptimyx")

In most cases, you don't need to download the package archive at all.

RchyOptimyx

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see RchyOptimyx.

Optimyzed Cellular Hierarchies for Flow Cytometry

Bioconductor version: 3.3

Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).

Author: Adrin Jalali, Nima Aghaeepour

Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at gmail.com>

Citation (from within R, enter citation("RchyOptimyx")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RchyOptimyx")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RchyOptimyx")

biocViews	FlowCytometry, Software
Version	2.12.0
In Bioconductor since	BioC 2.10 (R-2.15) (4.5 years)
License	Artistic-2.0
Depends	R (>= 2.10)
Imports	Rgraphviz, sfsmisc, graphics, methods, graph, grDevices, flowType(>= 2.0.0)
LinkingTo
Suggests	flowCore
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	RchyOptimyx_2.12.0.tar.gz
Windows Binary	RchyOptimyx_2.12.0.zip (32- & 64-bit)
Mac OS X 10.9 (Mavericks)	RchyOptimyx_2.12.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/RchyOptimyx/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/RchyOptimyx/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: