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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EGSEAdata")
In most cases, you don't need to download the package archive at all.
EGSEAdata
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see EGSEAdata.
Gene set collections for the EGSEA package
Bioconductor version: 3.3
This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.
Author: Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth
Maintainer: Monther Alhamdoosh <m.hamdoosh at gmail.com>
Citation (from within R,
enter citation("EGSEAdata")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EGSEAdata")
Documentation
| Reference Manual | ||
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | ExperimentData |
| Version | 1.0.1 |
| License | file LICENSE |
| Depends | R (>= 3.3) |
| Imports | |
| LinkingTo | |
| Suggests | EGSEA |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | EGSEA |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | EGSEAdata_1.0.1.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/EGSEAdata/ |
| Package Downloads Report | Download Stats |
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