To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RITAN")

In most cases, you don't need to download the package archive at all.

RITAN

Rapid Integration of Term Annotation and Network resources

Bioconductor version: Release (3.5)

Tools for comprehensive gene set enrichment and extraction of multi-resource high confidence subnetworks.

Author: Michael Zimmermann

Maintainer: Michael Zimmermann <zimmermann.michael at mayo.edu>

Citation (from within R, enter citation("RITAN")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RITAN")

biocViews	FunctionalGenomics, GeneSetEnrichment, Network, NetworkEnrichment, NetworkInference, QualityControl, Software
Version	1.0.0
In Bioconductor since	BioC 3.5 (R-3.4) (0.5 years)
License	file LICENSE
Depends	R (>= 3.4), ProNet
Imports	grid, gridExtra, reshape2, gplots, ggplot2, plotrix, RColorBrewer, STRINGdb, MCL, linkcomm, hash, png, sqldf, igraph, knitr, RITANdata
LinkingTo
Suggests	rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Source Package	RITAN_1.0.0.tar.gz
Windows Binary	RITAN_1.0.0.zip
Mac OS X 10.11 (El Capitan)	RITAN_1.0.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RITAN
Package Short Url	http://bioconductor.org/packages/RITAN/
Package Downloads Report	Download Stats

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