To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

phastCons100way.UCSC.hg19

UCSC phastCons conservation scores for hg19

Bioconductor version: Release (3.5)

Store UCSC phastCons conservation scores for the human genome (hg19) calculated from multiple alignments with other 99 vertebrate species.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons100way.UCSC.hg19")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

biocViews	AnnotationData, GScores, Genetics, Homo_sapiens
Version	3.5.0
License	Artistic-2.0
Depends	R (>= 3.0.0), GenomicScores(>= 0.99.0)
Imports	utils, S4Vectors, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	RareVariantVis
Suggests Me	ATACseqQC, GenomicScores, VariantFiltering

Follow Installation instructions to use this package in your R session.

Source Package	phastCons100way.UCSC.hg19_3.5.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	http://bioconductor.org/packages/phastCons100way.UCSC.hg19/
Package Downloads Report	Download Stats

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