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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("etec16s")
In most cases, you don't need to download the package archive at all.
etec16s
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Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment
Bioconductor version: Release (3.5)
16S rRNA gene sequencing data to study changes in the faecal microbiota of 12 volunteers during a human challenge study with ETEC (H10407) and subsequent treatment with ciprofloxacin.
Author: Joseph N. Paulson
Maintainer: Joseph N. Paulson <jpaulson at jimmy.harvard.edu>
Citation (from within R,
enter citation("etec16s")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("etec16s")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("etec16s")
| R Script | etec16s | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | ExperimentData, MicrobiomeData, SequencingData |
| Version | 1.4.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.3), Biobase, metagenomeSeq(>= 1.12.0) |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | metavizr |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | etec16s_1.4.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/etec16s |
| Package Short Url | http://bioconductor.org/packages/etec16s/ |
| Package Downloads Report | Download Stats |
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