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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")
In most cases, you don't need to download the package archive at all.
minionSummaryData
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Summarised MinION sequencing data published by Ashton et al. 2015
Bioconductor version: Release (3.5)
Summarised MinION sequencing data for Salmonella Typhi published by Ashton et al. in 2015. Three replicate runs are each provided as Fast5Summary objects.
Author: Mike Smith [aut, cre]
Maintainer: Mike Smith <grimbough at gmail.com>
Citation (from within R,
enter citation("minionSummaryData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")
Documentation
| HTML | R Script | Creating example MinION summary dataset |
| Reference Manual | ||
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | ExperimentData, SequencingData |
| Version | 1.6.0 |
| License | MIT + file LICENSE |
| Depends | R (>= 3.2.0) |
| Imports | |
| LinkingTo | |
| Suggests | BiocStyle, knitr, rmarkdown |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | IONiseR |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | minionSummaryData_1.6.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/minionSummaryData |
| Package Short Url | http://bioconductor.org/packages/minionSummaryData/ |
| Package Downloads Report | Download Stats |
Documentation »
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