flowQB

DOI: 10.18129/B9.bioc.flowQB    

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowQBData.

Automated Quadratic Characterization of Flow Cytometer Instrument Sensitivity: Q, B and CV instrinsic calculations

Bioconductor version: 3.9

flowQB is a fully automated R Bioconductor package to calculate automatically the detector efficiency (Q), optical background (B) and intrinsic CV of the beads.

Author: Josef Spidlen, Faysal El Khettabi, Wayne Moore, David Parks, Ryan Brinkman

Maintainer: Josef Spidlen <jspidlen at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowQB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowQB")

 

PDF	R Script	flowQB package
PDF		Reference Manual
Text		NEWS

Details

biocViews	FlowCytometry, ImmunoOncology, MultiChannel, OneChannel, PeakDetection, QualityControl, Regression, Software
Version	2.11.1
In Bioconductor since	BioC 2.11 (R-2.15) (7 years)
License	Artistic-2.0
Depends
Imports	methods, flowCore(>= 1.32.0), stats, extremevalues
LinkingTo
Suggests	flowQBData, FlowRepositoryR, xlsx, RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	flowQBData
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowQB_2.11.1.tar.gz
Windows Binary	flowQB_2.11.1.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	flowQB_2.11.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowQB
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowQB
Package Short Url	https://bioconductor.org/packages/flowQB/
Package Downloads Report	Download Stats