Fletcher2013b

DOI: 10.18129/B9.bioc.Fletcher2013b    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Fletcher2013b.

Master regulators of FGFR2 signalling and breast cancer risk

Bioconductor version: 3.9

This package reproduces the systems biology analysis for the data in package Fletcher2013a using RTN.

Author: Mauro Castro, Michael Fletcher, Florian Markowetz and Kerstin Meyer.

Maintainer: Mauro Castro <mauro.a.castro at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Fletcher2013b")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Fletcher2013b")

 

PDF	R Script	Main vignette:Fletcher2013b
PDF		Reference Manual

Details

biocViews	BreastCancerData, CancerData, ChIPSeqData, ExperimentData, SNPData
Version	1.20.0
License	GPL (>= 2)
Depends	R (>= 2.15), Fletcher2013a, RTN(>= 1.1.2), RedeR(>= 1.8.1), igraph
Imports	RColorBrewer
LinkingTo
Suggests
SystemRequirements
Enhances
URL	http://dx.doi.org/10.1038/ncomms3464
Depends On Me
Imports Me
Suggests Me	geneplast, RTNsurvival
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Fletcher2013b_1.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/Fletcher2013b
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Fletcher2013b
Package Short Url	https://bioconductor.org/packages/Fletcher2013b/
Package Downloads Report	Download Stats