Cormotif

Correlation Motif Fit


Bioconductor version: Release (3.19)

It fits correlation motif model to multiple studies to detect study specific differential expression patterns.

Author: Hongkai Ji, Yingying Wei

Maintainer: Yingying Wei <ywei at jhsph.edu>

Citation (from within R, enter citation("Cormotif")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Cormotif")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Cormotif")
Cormotif Vignette PDF R Script
Reference Manual PDF

Details

biocViews DifferentialExpression, Microarray, Software
Version 1.50.0
In Bioconductor since BioC 2.9 (R-2.14) (13 years)
License GPL-2
Depends R (>= 2.12.0), affy, limma
Imports affy, graphics, grDevices
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Cormotif_1.50.0.tar.gz
Windows Binary Cormotif_1.50.0.zip
macOS Binary (x86_64) Cormotif_1.50.0.tgz
macOS Binary (arm64) Cormotif_1.50.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Cormotif
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Cormotif
Bioc Package Browser https://code.bioconductor.org/browse/Cormotif/
Package Short Url https://bioconductor.org/packages/Cormotif/
Package Downloads Report Download Stats