To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("yamss")
In most cases, you don't need to download the package archive at all.
yamss
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Tools for high-throughput metabolomics
Bioconductor version: Release (3.5)
Tools to analyze and visualize high-throughput metabolomics data aquired using chromatography-mass spectrometry. These tools preprocess data in a way that enables reliable and powerful differential analysis.
Author: Leslie Myint [cre, aut], Kasper Daniel Hansen [aut]
Maintainer: Leslie Myint <lmyint1 at jhu.edu>
Citation (from within R,
enter citation("yamss")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("yamss")
Documentation
| HTML | R Script | yamss User's Guide |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | MassSpectrometry, Metabolomics, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (1 year) |
| License | Artistic-2.0 |
| Depends | R (>= 3.3.0), methods, BiocGenerics(>= 0.15.3), SummarizedExperiment |
| Imports | IRanges, stats, S4Vectors, EBImage, Matrix, mzR, data.table, grDevices, limma |
| LinkingTo | |
| Suggests | BiocStyle, knitr, rmarkdown, digest, mtbls2, testthat |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/hansenlab/yamss |
| BugReports | https://github.com/hansenlab/yamss/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | yamss_1.2.0.tar.gz |
| Windows Binary | yamss_1.2.0.zip |
| Mac OS X 10.11 (El Capitan) | yamss_1.2.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/yamss |
| Package Short Url | http://bioconductor.org/packages/yamss/ |
| Package Downloads Report | Download Stats |
Documentation »
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