flowMerge

DOI: 10.18129/B9.bioc.flowMerge    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see flowMerge.

Cluster Merging for Flow Cytometry Data

Bioconductor version: 3.9

Merging of mixture components for model-based automated gating of flow cytometry data using the flowClust framework. Note: users should have a working copy of flowClust 2.0 installed.

Author: Greg Finak <gfinak at fhcrc.org>, Raphael Gottardo <rgottard at fhcrc.org>

Maintainer: Greg Finak <gfinak at fhcrc.org>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowMerge")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowMerge")

 

HTML	R Script	Merging Mixture Components for Cell Population Identification in Flow Cytometry Data The flowMerge Package.
PDF		Reference Manual

Details

biocViews	Clustering, FlowCytometry, ImmunoOncology, Software
Version	2.32.0
In Bioconductor since	BioC 2.5 (R-2.10) (10 years)
License	Artistic-2.0
Depends	graph, feature, flowClust, Rgraphviz, foreach, snow
Imports	rrcov, flowCore, graphics, methods, stats, utils
LinkingTo
Suggests	knitr, rmarkdown
SystemRequirements
Enhances	doMC, multicore
URL
Depends On Me
Imports Me	CONFESS, flowType
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowMerge_2.32.0.tar.gz
Windows Binary	flowMerge_2.32.0.zip
Mac OS X 10.11 (El Capitan)	flowMerge_2.32.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowMerge
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowMerge
Package Short Url	https://bioconductor.org/packages/flowMerge/
Package Downloads Report	Download Stats